BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F05SP1|AL425152
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1032 1911 0.0
>3x_Contig1032
Length = 3920
Score = 1911 bits (962), Expect = 0.0
Identities = 986/993 (99%), Gaps = 3/993 (0%)
Strand = Plus / Plus
Query: 1 atcatcgctcggtttgtaccaaaattcggtaacgaggtacagatgtgctctcttttcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2315 atcatcgctcggtttgtaccaaaattcggtaacgaggtacagatgtgctctcttttcccc 2374
Query: 61 gttagagtgcacgataaagatcgcaacgaggtacgtttactcgtattaaatcgtcttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2375 gttagagtgcacgataaagatcgcaacgaggtacgtttactcgtattaaatcgtcttcca 2434
Query: 121 atgagtgaagatgaaagaaacagtgcgttccccaagatgtgcgaatctaccgagttggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2435 atgagtgaagatgaaagaaacagtgcgttccccaagatgtgcgaatctaccgagttggag 2494
Query: 181 cccgaagatgaggcaatgggccaatttgtcgactcaatgaatctggataatgatgcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2495 cccgaagatgaggcaatgggccaatttgtcgactcaatgaatctggataatgatgcacag 2554
Query: 241 gacttgccatggtacgagagtaaccagatacagaagtatacagacgtggcactagagagc 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
Sbjct: 2555 gacttgccatggtacgagagtgaccagatacagaagtatacagacgtggcactggag--c 2612
Query: 301 agtcctctttgcccctaccacaacgtgaaatgttccgagccactgcaagaaacccatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2613 agtcctctttgcccctaccacaacgtgaaatgttccgagccactgcaagaaacccatcag 2672
Query: 361 caatcccagctatctcactacatagacagcagcaagtgatcctcgagtgcgttcatcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 caatcccagctatctcactacatagacagcagcaagtgatcctcgagtgcgttcatcaga 2732
Query: 421 agttcatcgttgggaaacgggatcaacaggacttaaacatcccaccgatgagcaagatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2733 agttcatcgttgggaaacgggatcaacaggacttaaacatcccaccgatgagcaagatga 2792
Query: 481 ttctcaagaagattactccaaaatacaacgctgacgtttctctgtcgaacaggatcaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2793 ttctcaagaagattactccaaaatacaacgctgacgtttctctgtcgaacaggatcaagg 2852
Query: 541 aacagttcaacgtagtaaagaaagaggtgtcggtacaaacaccagtraatattgaacaag 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2853 aacagttcaacgtagtaaagaaagaggtgtcggtacaaacaccagtgaatattgaacaag 2912
Query: 601 agtttgaagaacaagaccctgaattgctcgatttggacctcttattagcgcgcggtgcac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2913 agtttgaagaacaagaccctgaattgctcgatttggacctcttattagcgcgcggtgcac 2972
Query: 661 gctagctaattcaggcactggttacatagtgatatctatacatatatatatatatatgag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2973 gctagctaattcaggcactggttacatagtgatatctatacatatatatatatatatgag 3032
Query: 721 acttctgtataaaaatgcaattgcgggataaaacgtggtgaatcgaatgggttacatctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3033 acttctgtataaaaatgcaattgcgggataaaacgtggtgaatcgaatgggttacatctc 3092
Query: 781 gaatggcaaccagcaccaggcaacccacgttacgacggccccyttgtcgtccgcaaacct 840
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3093 gaatggcaaccagcaccaggcaacccacgttacgacggcccc-ttgtcgtccgcaaacct 3151
Query: 841 gcctttttccccatattcttcagatctctaaagttcgtttcccttctttccattctcgac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 gcctttttccccatattcttcagatctctaaagttcgtttcccttctttccattctcgac 3211
Query: 901 cacgagatttccatataagcacagaaagaattacgagccacaagacgaaaaacctgtttt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 cacgagatttccatataagcacagaaagaattacgagccacaagacgaaaaacctgtttt 3271
Query: 961 aaggsttggcacagagatttacaaaccaattga 993
|||| ||||||||||||||||||||||||||||
Sbjct: 3272 aaggcttggcacagagatttacaaaccaattga 3304
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,023
Number of Sequences: 1807
Number of extensions: 10023
Number of successful extensions: 1377
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)